Posted by: Institute of Food Research

Scientists from the Norwich Research Park (NRP) have discovered an antibiotic-producing enzyme in oats that could be used in the future to protect major cereal crops from fungal diseases such as “take-all”. This disease is estimated to affect half the UK’s wheat crops costing the agricultural industry up to £60 million per year.

NRP scientists led by Professor Anne Osbourn at The John Innes Centre (Norwich, UK) in collaboration with the Institute of Grassland and Environmental Research (IGER) (Aberystwyth, UK) and the Institute of Plant Molecular Biology (IPMB, Université Louis Pasteur, Strasbourg, France) found that an enzyme from oats, called Sad2, helps produce a chemical that makes the plant resistant to infections. Take-all is a particularly damaging fungal disease because it infects the roots of the plant and can be passed onto subsequent crops grown in the same field. The researchers found that Sad2 functions in the roots, producing the antimicrobial at the site most vulnerable to fungal attack. The research, funded by the Biotechnology & Biological Sciences Research Council and Gatsby Foundation, is published in the Proceedings of the National Academy of Sciences this week and shows that Sad2 has evolved from an ancient family of enzymes that have remained unchanged over millions of years and are almost identical across the plant, fungi and animal kingdoms. All the other enzymes in this family are involved in producing essential fats called sterols, such as cholesterol in humans, and include targets for cholesterol-lowering drugs, antifungals and herbicides. The discovery of a new member of this enzyme family with a completely different function was therefore surprising.

“Many plants produce chemicals called ‘natural products’ that are not essential to growth but have a range of important ecological functions. They can be attractants for pollinating insects or, in this case, protect the plant against diseases,” explains Professor Osbourn “Our aim in this work is to understand how these natural products are made and why the ability to produce particular natural products is limited to certain plant species. Our data show that the Sad2 gene has evolved from the most ancient and highly conserved cytochrome P450 family by gene duplication and has then diverged from its original role in making sterols to adopt a new function producing an antimicrobial chemical called avenacin”.

The synthesis of avenacin is a multistep process; the JIC team have already identified five genes coding for different enzymes in this pathway and are currently isolating the others. Unexpectedly, they found these genes were clustered together in the plant’s genetic code; clusters of genes that have connected functions are often found in bacteria or fungi but are extremely rare in plants.

“This is only the second gene cluster that has been identified in plants, but I now believe they are more common than previously thought,” says Professor Osbourn, “If we could transfer this gene cluster from oats into other plants, it might be possible to breed cereals that are resistant to devastating crop diseases such as take-all. Our findings also have broad significance for understanding how new metabolic pathways arise in plants, and this is an area that we are now investigating in other plant species such as rice and in the model plant Arabidopsis.”

The Sad2 gene technology is the subject of a pending worldwide patent application (International Patent Publication Number WO 2006/044508) assigned to the technology transfer company PBL. PBL are currently working closely with the AgBiotech company DuPont to develop further and commercially exploit applications of the technology. Further commercial partners are also being sought by PBL for certain applications of the technology.

BACKGROUND

The Norwich Research Park (NRP) includes the John Innes Centre (JIC), University of East Anglia (UEA), the Institute of Food Research (IFR), the Sainsbury Laboratory and the Norfolk and Norwich University Hospital NHS Trust. Located 3 miles from the city centre, the NRP is home to 9000 staff and over 1000 postgraduate research science students.

The JIC, Norwich, UK is an independent, world-leading research centre in plant and microbial sciences with over 800 staff. JIC carries out high quality fundamental, strategic and applied research to understand how plants and microbes work at the molecular, cellular and genetic levels. The JIC also trains scientists and students, collaborates with many other research laboratories and communicates its science to end-users and the general public. The JIC is grant-aided by the Biotechnology and Biological Sciences Research Council (BBSRC). 

Institute of Grassland and Environmental Research (IGER) is known throughout the world for its scientific contribution to forage-related plant breeding, plant biology and genetics, animal science and nutrition, organic dairying, soil science and agro-ecology. 

The Université Louis Pasteur (ULP), with over 18,000 students, is distinctive for its scientific contributions which place it among the top-ranking French and European universities. ULP progresses by exploring, for example, new scientific fields through the interfacing of biology and chemistry with physics, medicine and computer science. It harbours the IBMP (Institute of Plant Molecular Biology), the largest plant research centre from CNRS (Centre National de la Recherche Scientifique).

(Plant Bioscience Limited (PBL) is an independent technology and intellectual property management company specialising in life sciences, including plant and microbial science. Formed in 1994, and with its main offices on the NRP site, PBL is jointly owned by the JIC, The Sainsbury Laboratory (Norwich, UK) and the BBSRC. 

The research paper authored by X. Qi, S. Bakht, B. Qin, R. Melton & A. Osbourn (JIC), M. Leggett (IGER), A. Hemmings (UEA), F. Mellon & J. Eagles (IFR), D. Werck-Reichhart & H. Schaller (ULP) entitled “A new function for a member of an ancient and highly conserved cytochrome P450 family – from essential sterols to plant defence” is published in the Proceedings of the National Academy of Sciences online on 20th November in advance of printing at www.pnas.org.