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Stem rust in wheat, multicountry: new strains

A ProMED-mail post
ProMED-mail is a program of the International Society for Infectious Diseases

April 6, 2006
From: ProMED-mail<promed@promedmail.org>

[1] South Australia
[2] Expert Panel on Ug99 Outbreak in East Africa
[3] Wheat imports to India allowed
[4] ARS, cooperators fight new Ug99 strain

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[1] South Australia
Date: 6 Apr 2006
From: ProMED-mail<promed@promedmail.org>
Source: www.abc.net.au [edited]
<http://www.abc.net.au/rural/news/content/2006/s1610195.htm>

South Australia could be facing one of its worst cropping seasons for the fungal disease stem rust. New strains of the disease have been found in wheat plants from across the Eyre Peninsula and the southern half of the Yorke Peninsula.

Hugh Wallwork of the South Australian Research and Development Institute says wet conditions over summer helped the disease to thrive. "I think it would be the most that I have come across in the last 20 years," he said. "To have this much stem rust at this time of the year with a lot of volunteers [plants] out in the field and looking like an early sowing season, it's looking worse than it has for a long time."

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[2] Expert Panel on Ug99 Outbreak in East Africa
Date: 13 March 2006
From: ProMED-mail<promed@promedmail.org>
Source: www.islam-online.net  edited]
<http://www.islam-online.net/English/Science/2006/03/article04.shtml>

Wheat ranks as a primary source of food and livelihood for hundreds of millions of people globally, especially in developing countries. But scientists are concerned that a newly discovered strain of one of the most dangerous pathogens to affect wheat could cause a global food crisis. First discovered in Uganda in 1999, Ug99 is a variant of the wheat pathogen known as stem rust, and expectations are that it will spread from its origin in eastern Africa to the rest of the wheat-growing world.

Over the past 150 years, stem rust pandemics have led to famines in India and massive grain losses in North America.

Modern breeding methods, combined with free international exchange of experimental wheat lines, have now led to the development and distribution of wheat varieties that have the ability to resist rust.

An "Expert Panel on the Stem Rust Outbreak in East Africa," led by Dr.
Ronnie Coffman, evaluated the threat of the new wheat stem rust variant, Ug99. Coffman presented the report of their study at a press conference held in Nairobi last September [2005] a day before the Global Rust Initiative (GRI) summit.

The Threat

"It is only a matter of time until Ug99 reaches across the Saudi Arabian peninsula into the Middle East, South Asia, and eventually East Asia and the Americas," said Coffman.

Dr. Ravi Singh, a scientist working with the International Maize and Wheat Improvement Center (CIMMYT), said that the disease was first discovered in Uganda in 1999. It later appeared in Kenya in 2001 followed by Ethiopia in 2003, showing its devastating potential to spread and destroy.

Need for Global Action

According to Nobel Peace Prize winner Professor Norman Borlaug, "Without an epidemic for the past 50 years, maybe we've become complacent."

Ug99 has so far survived attempts to curtail it, according to the panel of experts. Since it is difficult to stop, the only option, especially for small-scale farmers, is to identify and develop resistant strains, explained Kiome, director of the Kenya Agricultural Research Institute.

A Global Rust Initiative (GRI) will have these recommendations as their mandate, creating an international partnership led by the International Maize and Wheat Improvement Center (CIMMYT), the International Center for Agricultural Research in the Dry Areas (ICARDA), the Kenyan Agricultural Research Institute (KARI) and the Ethiopian Agricultural Research Organization (EARO).

Among the measures recommended by the panel is the monitoring of wheat populations by means of trap nurseries. These nurseries use wheat varieties known to have resistant genes and test their reaction to rust disease. Data obtained from the reaction of these resistant varieties is used to identify the different forms of pathogen.

As the pathogen population changes itself to infect wheat cultivars with different resistant genes, variations in the pathogen population must be identified. This identification process must be done through race-analysis for the Kenya-Ethiopia region, adjacent areas and beyond, according to the panel.

Another recommendation is the establishment of warning systems based on data using the Geographical Information System, which coordinates data collected using satellite imagery and data collected at the fields.

The panel also recommended a breeding strategy that would incorporate diverse genetic resistance to Ug99 into the modern cultivars currently grown in North America and Asia before the new strain of pathogen migrates to those areas. DNA-marker assisted selection should be used where feasible.

Chemical intervention for short-term control would be equally important in curtailing the wheat disease, and should be employed by all producers, according to the recommendations.

Seed multiplication agencies and community-based organizations should also be encouraged to produce commercial seeds for the newly developed stem rust resistant varieties.

Baseline studies need to be made in crops, both infected and not, and impact studies carried out after the use of resistant varieties. Such studies would have to take into consideration alternative crops and livelihood systems, because of the socio-economic implications of the new disease on wheat-producing countries.

Human resources need to be augmented through training programs. Advanced degree training should be provided for people associated with the project, in addition to in-country practical courses and specialized courses outside the country.

Well-equipped laboratories and effective communication systems are also needed to address the new threat. Facilities for wheat research should therefore be established and strengthened in Ethiopia and Kenya.

Special support needs to be given to communication strategies to raise and maintain awareness of the stem rust problem, while enhancing communication among scientists and other concerned stakeholders

Appropriate advanced research institutes like the ones in North America and Australia should be engaged in the GRI that utilize their own resources, said the panel report. CIMMYT and ICARDA should receive additional resources from advanced research institutes and other donors to coordinate the GRI and meet their respective research responsibilities necessary to avert an epidemic.

"For once, Africa can help the rest of the world," said Dr Marianne Banzinger, the Director of CIMMYT's African Livelihoods Program. "There is time to make a difference. This is a chance we cannot afford to miss."

[Byline: Ochieng Ogodo ogodo16@hotmail.com]

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[3] Wheat imports to India allowed
Date: 12 Feb 2006
From: ProMED-mail<promed@promedmail.org>
Source: www.hindu.com [edited]
<http://www.hindu.com/thehindu/holnus/002200602121050.htm>

Expressing concern over the government's decision to import wheat after a span of 7 years, eminent agriculture scientist M S Swaminathan has warned against complacency in matters relating to food security.

"The decision to allow wheat import is a wake-up call that shows any complacency will be disastrous for food and national security," Swaminathan told PTI here.

Earlier this month [Feb 2006], the government decided to allow importation of 5 lakh [one lakh is 100 000; so 5 lakh are 500 000] metric tons of wheat to tide over the short supplies in Karnataka, Kerala and Andhra Pradesh.

The import decision is also a "wake-up call" in the sense that there is no point to relax at a time when stem rust such as the 'Ug 99' [strain] is creating havoc to the wheat crop in Africa.

"We should take adequate safeguard against such stem rust which might intrude into our country," he said.

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[4] ARS, cooperators fight new Ug99 strain
Date: 15 Feb 2006
From: ProMED-mail<promed@promedmail.org>
Source: www.theprairiestar.com [edited]
<http://www.theprairiestar.com/articles/2006/02/15/special_section/seed-planting-tillage/seed04.txt>


Potential damage to African wheat from a new strain of wheat stem rust could be avoided, thanks to research that Agricultural Research Service (ARS) scientists have shared with researchers in East Africa.

Researchers have screened U.S. wheat varieties in Kenya for resistance to Ug99, the most virulent new strain of wheat stem rust in 50 years. This could help avoid a major threat to wheat growing there and around the world.

Leaders in wheat research from ARS and other organizations met at a Global Rust Summit organized by Nobel Peace Prize winner and father of the "Green Revolution" Norman Borlaug and held in Nairobi, Kenya, in September 2005, to enlist aid to address the Ug99 problem. Ug99 was first found in Uganda in 1999, but it has now spread to Kenya and Ethiopia, with the potential to seriously damage wheat production.

M. Kay Simmons, ARS national program leader for grain crops, and A. Richard Bennett, ARS national program leader for plant health, traveled to Africa to contribute to the summit.

Even before the summit took place, a partnership of ARS, the Kenyan Agricultural Research Institute and the International Maize and Wheat Improvement Center began testing more than 800 U.S. wheat cultivars and genetic resources in field trials in Kenya.

While most U.S. bread wheats are vulnerable, results from the Kenya evaluation revealed good sources of resistance in each class of wheat.

The assistance that has been offered to Kenya was initiated to answer the call for helping preserve wheat production in developing countries. But the research also offers basic information that ARS may need some day, should Ug99 ever appear in the United States.

ARS is the U.S. Department of Agriculture's chief scientific research agency.

--
ProMED-mail
<promed@promedmail.org

[The cereal crop plant wheat (bread wheat, _Triticum aestivum_ and durum wheat, _Triticum turgidum_) develops symptoms of stem rust when infected with the fungus _Puccinia graminis f.sp. tritici_. Severe losses due to wheat stem rusts have been held at bay worldwide due to effective resistance breeding.

Part [1] above is the most recent, reporting new strains of stem rust in Australia. Little detail is provided on their characteristics with regards to resistance-breaking potential. This underlines the fact that new strains of the fungus can and will emerge over time to threaten currently grown varieties of wheat.

This moderator has included 3 other recent articles on another new strain of stem rust known as Ug99. It has spread from Uganda to Kenya and Ethiopia and has caught the attention of international plant pathologists for its potential to become a world threat. An international meeting was held on Ug99 in 2005 and some of the points discussed there are outlined in part [2]. The full report of the meeting is to be found in the first link below. The threat of introducing this strain to India is commented on in part [3]. This biosecurity issue is linked to the recently announced (Feb 2006) willingness to import large quantities of wheat after a 7-year prohibition. Finally, the long-term plan to combat new strains of stem rust -- now, as in the past -- relies on finding, breeding or creating wheat cultivars with resistance to any new strain of the pathogen. Part [4] outlines ongoing efforts in this regard with respect to strain Ug99.

Map: Australia Eyre and Yorke peninsulas:
<http://www.wilmap.com.au/samaps/samap.html>

Pictures:
<http://www.cdl.umn.edu/gifs/wsr.jpg>
<http://www.cdl.umn.edu/nomenclature/inf_set.jpg>

Links:
http://www.cimmyt.org/english/wps/news/2005/aug/stemRust.htm
http://www.ars.usda.gov/research/publications/Publications.htm?seq_no_115=182455
http://www.csiro.au/csiro/content/standard/psfe,,.html
http://www.sciencenews.org/articles/20050924/food.asp
- Mod.JAD]

[see also in the
archive:
2005
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Wheat stem rust, Ug99, new strain - East Africa 20050928.2849 Wheat stem rust, new strain - Uganda 20050912.2698
2002
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Wheat stem rust fungus, new virulence genes - So Afr 20020814.5049 2000
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Wheat stem rust in resistant wheat lines - Uganda (02) 20000713.1162 Wheat stem rust in resistant wheat lines - Uganda 20000702.1092
1999
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Stem-rust fungus, mutant, wheat - Uganda 19990519.0812]

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