Washington, DC
October 6, 2005
The
National Science Foundation (NSF) made 19 new awards
totaling $58.7 million in the eighth year of its Plant Genome
Research Program (PGRP). The 2- to 5- year awards, ranging from
$622,000 to $7.7 million, fund research and tools to reveal
information in the genomes of economically important crop plants
such as wheat and soybeans as well as increase understanding of
the genetic control of plant processes including disease
resistance, flavor development, seed growth and wood formation.
"PGRP-funded research is helping to unearth secrets rooted in
plant genomes," said Mary Clutter, head of NSF's biological
sciences directorate. "In addition to enabling discoveries in
basic plant biology, these latest projects will expose a host of
new students to cutting-edge plant genome research. Well-trained
students are critical to the future of plant biology," Clutter
continued.
The new awards, made to 36 U.S. institutions in 24 states,
include three international collaborative projects. First-time
PGRP award recipients include California Polytechnic State
University-San Luis Obispo, Claflin University, Michigan
Technological University, University of Puget Sound, University
of South Carolina and University of Wyoming.
The genomes of economically important plants are often large and
complex, but through in-depth studies scientists will uncover
information that can be translated into new and improved
products and practices. Plant genome research holds enormous
promise for improving plants of all sizes, from small crop
plants to towering trees.
Examples of awards targeting major crop plants include:
- A project led by the
University of Washington in Seattle investigates the poorly
understood, yet widely accepted phenomenon of "hybrid
vigor," whereby offspring turn out bigger and hardier
than their parents.
- Researchers at University
of Illinois Urbana-Champaign explore nitrogen responses in
maize to elucidate the genetic basis for dramatically
increased yields following fertilization. This project
includes an NSF-supported Developing Country Collaboration
with the International Institute for Tropical Agriculture in
Nigeria.
- A University of
California, Los Angeles-led project focuses on the
soybean to identify all of the genes and regulatory
networks required to make a seed. Knowledge gained from
studying soybean seed, an important source of human and
animal nutrition and a raw material for industrial
applications, will likely be applicable to seeds from all
plants.
Another subset of awards centers
on understanding the genetics of trees. Trees are naturally
important to produce oxygen, provide shade and fight soil
erosion and also supply more than 5,000 items in our daily
lives--from fuels and paper to fruit and medicines. Studying
trees has challenged researchers, in part because of the plants'
large sizes and long life cycles. Three projects are developing
and using genomic tools to better understand tree metabolism and
development.
- Researchers at the
University of California, Davis study genetic variation
associated with wood quality and disease resistance in
loblolly pine, potentially developing new resources for
tree breeding.
- Michigan Technological
University investigates the metabolic pathways leading
to synthesis of salicylates, aspirin-related plant
compounds that confer disease resistance in poplar
trees.
- Mississippi State
University researchers examine the regulation of genes
associated with the flowering process in poplar trees.
The PGRP, established in 1998 as
part of the coordinated National Plant Genome Initiative by the
Interagency Working Group on Plant Genomes of the National
Science and Technology Council, has a long-term goal of
advancing the understanding of the structure and function of
genomes of plants of economic importance.
Complete list of the 2005 PGRP awards and links to project
abstracts:
National Science Foundation
Plant Genome Research Program
Collaborative Research on Functional
Genomics |
Principal Investigator |
Institution |
Title |
Total Award ($) |
Total Duration (yrs) |
Barbazuk, William
0501758 |
Danforth Plant Science Center |
Ab Initio Gene Finding in Maize |
$622,027 |
2 |
Bennetzen, Jefferey
0501814 |
University of Georgia Research
Foundation Inc.
|
Characterizing the Wheat Genome by
Random Sample Sequencing |
$1,471,641 |
3 |
Brutnell, Thomas
0501713 |
Boyce Thompson Institute |
A Two Component Activator/Discussion
Platform for Reverse and Forward Genetic
Analysis in Maize |
$3,779,502 |
5 |
Comai, Luca
0501712 |
University of Washington |
Functional Genomics of Plant Polyploids |
$7,766,348 |
5 |
Galbraith, Dale
0501914 |
University of Arizona |
Self-assembling Autofluorescent Protein
Microarrays, a Universal Resource for
The Plant Research Community |
$1,674,010 |
2 |
Goldberg, Robert
0501720 |
University of Cal Los Angeles |
Genes Required to Make a Soybean Seed |
$7,571,004 |
5 |
Jackson, David
0501862 |
Cold Spring Harbor |
Characterizing Sub-cellular Compartments
in Maize Using Fluorescent Protein
Tagged Lines |
$4,950,172 |
5 |
Jackson, Scott
0501877 |
Purdue University |
SoyMap: an Integrated Soybean Genome Map |
$4,496,047 |
4 |
Jorgensen, Richard
0501824 |
University of Arizona |
Functional Genomics by Sense-RNAi: A
Forward Genetic Approach for
Cell-Type-Targeted Mutagenesis and for
Polyploids |
$1,641,880 |
3 |
Klee, Harry
0501778 |
University of Florida |
Functional Genomic Analysis of Fruit
Flavor and Nutrition Pathways |
$2,019,969 |
4 |
Harper Jeffrey
0530346 |
The Scripps Research Institute |
Prediction and Validation of
Phospho-Regulatory Sites in Crop Plant
Proteomes |
$691,501 |
2 |
Langley, Charles
0501763 |
University of Cal Davis |
Association Genetics of Natural Genetic
Variation and Complex Traits in Pine |
$5,902,886 |
4 |
Luthe, Dawn
0501890 |
Mississippi State University
|
Functional Genomics of Woody Perennial
Flowering |
$1,753,316 |
3 |
Moose, Stephen
0501700 |
University of III Urbana-Champaign |
Gene Discovery for Maize Responses to
Nitrogen |
$2,606,096 |
5 |
Schwartz, David
0501818 |
University of Wisconsin Madison
|
A Genome-Wide Optical Map for Maize |
$983,908 |
2 |
Tsai, Chung-Jui
0421756 |
MI Tech University |
A Functional Genomics Approach to
Investigate Regulation of Phenolic
Glycoside Metabolism in Populus |
$2,114,095 |
4 |
Vance, Vicki
0501760 |
USC Research Foundation |
Small RNAs in Rice and Maize |
$1,203,620 |
3 |
Voytas, Daniel
0501678 |
Iowa State University |
A Homologous Recombination System for
Plants Based on Zinc Finger Nucleases |
$1,931,010 |
4 |
Wise, Roger
0500461 |
Iowa State University
|
Functional Genomics of Plant Disease
Defense Pathways |
$2,093,192 |
4 |
Yu, Yeisoo
0501857 |
University of Arizona |
Maize Full-length cDNA Project |
$4,658,148 |
2.5 |
|