St. Louis, Missouri, and Cold Spring Harbor, New York
September 12, 2003
Orion
Genomics, LLC and Cold Spring
Harbor Laboratory (CSHL) announced today an arrangement
whereby CSHL will use Orion’s proprietary GeneThresher® sorghum
sequences to annotate the genomes of rice and other grasses for
the public domain. CSHL and Orion Genomics published today the
first release on the CSHL
www.gramene.org Web site. In 2003, Orion scientists will
double the present amount of sorghum sequence and together with
CSHL are planning a second annotation of the rice genome to be
release early in 2004.
“The Gramene site is a world-class Web-accessible data resource for
comparative genome analysis of grasses,” said Nathan Lakey,
President and Chief Executive Officer of Orion Genomics. “The
grass family of plants is responsible for much of the food
production world wide and includes important crops such as corn,
rice, wheat, barley, and sorghum. Gene research in the grasses,
facilitated by web sites such as Gramene, will lead to
improvements in agriculture including increased resistance to
environmental stress such as drought and protection from pests.”
While the underlying GeneThresher® sorghum sequences are
proprietary to Orion, the annotations resulting from comparison
with these gene-enriched sequences are being posted on the
Gramene web site and used to annotate the rice genome. A draft
of the rice genome sequence was completed in the public sector
in December 2002 by an international consortium led by
Japan,
and supported in the USA by the National Science Foundation and
the US Department of Agriculture.
“Comparative genomics is proving to be a powerful tool for
identifying the correct gene models across the cereal species,
and today's release of the alignments of the sorghum data to the
rice genome is an important step in the public research
community's understanding of the genomes of rice and related
grasses,” said Lincoln Stein, Associate Professor at Cold Spring
Harbor Laboratory. “I am very grateful to Orion Genomics for
making its privately-held data set available in a way that
allows the public research sector to benefit from it, and I am
very proud of the role that the Gramene resource has played in
this process.”
Orion Genomics,
LLC, located at the Center for Emerging Technologies in
St. Louis, Missouri, is a profitable
biotechnology company, developing and commercializing
intellectual property and advanced genome analysis tools. The
scientific staff and the company’s founders are pioneers in
genome and DNA methylation technologies. Orion’s first DNA
methylation-based technology, trademarked as GeneThresher®,
provides for the efficient sequencing of plant genomes. Orion’s
second DNA methylation-based technology, trademarked as
MethylScope™, is the first high-throughput technique capable of
comprehensively detecting changes in DNA methylation on
microarrays, and will have applications in cancer, obesity,
diabetes, autoimmune disease, psychiatric disorders, plant
sciences, and biodefense.
Cold Spring Harbor Laboratory is recognized
internationally for its excellence in basic research (including
plant biology, cancer and neurobiology) as well as a wide range
of educational activities that include extensive postgraduate
courses and a Ph.D. program in the Watson School of Biological
Sciences. The Laboratory also hosts numerous scientific meetings
each year attended by more than 6,500 biologists from around the
world. The laboratory is headed by Director and CEO Bruce
Stillman and President James D. Watson. |